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scShapeBench: Discovering geometry from high dimensional scRNAseq data

arXiv cs.LG · 2026-05-14 Cached

Introduces scShapeBench, a benchmark dataset for shape detection in high-dimensional single-cell data, and scReebTower, a baseline method that uses diffusion geometry and Reeb graphs to classify data shapes into clusters, trajectories, multi-branches, and archetypes.

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